STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAF4BTATA-box binding protein associated factor 4b. (857 aa)    
Predicted Functional Partners:
TAF11
TAFII28 domain-containing protein.
    
 0.991
TAF1
Transcription initiation factor TFIID subunit.
    
 0.970
TAF7
TATA-box binding protein associated factor 7.
    
 0.969
H0ZGV6_TAEGU
TAF4 domain-containing protein.
  
  
 
0.960
TAF4
TAFH domain-containing protein.
     
 
0.959
TAF12
TATA-box binding protein associated factor 12.
    
 0.955
TAF2
Uncharacterized protein.
    
 0.955
TAF13
Putative TAF13 RNA polymerase II TATA box binding protein-associated factor variant 1.
    
 0.951
TAF3
TATA-box binding protein associated factor 3.
    
 0.944
TAF5
TATA-box binding protein associated factor 5.
   
 0.928
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.