STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATA1Erythroid transcription factor. (386 aa)    
Predicted Functional Partners:
LMO2
LIM domain only 2.
    
 0.968
ZFPM1
Uncharacterized protein.
   
 0.930
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
   
 0.900
EP300
E1A binding protein p300.
    
 0.818
ZFPM2
Zinc finger protein, FOG family member 2.
    
 0.754
GATA2
GATA binding protein 2.
  
  
0.715
NKX2-5
Homeobox domain-containing protein.
   
 0.709
CREBBP
CREB binding protein.
    
 0.672
LDB1
LIM domain binding 1.
    
 0.668
LDB2
LIM domain binding 2.
    
 0.668
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.