STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALKBH8Uncharacterized protein. (773 aa)    
Predicted Functional Partners:
LOC115492155
Multifunctional methyltransferase subunit TRM112-like protein.
   
 
 0.758
FTO
FTO alpha-ketoglutarate dependent dioxygenase.
     
 0.737
BAALC
BAALC binder of MAP3K1 and KLF4.
      
 0.650
ENSTGUP00000031019
annotation not available
   
 
 0.612
ALKBH1
AlkB homolog 1, histone H2A dioxygenase.
      
 0.578
ALKBH2
AlkB homolog 2, alpha-ketoglutarate dependent dioxygenase.
      
 0.557
BUD23
BUD23 rRNA methyltransferase and ribosome maturation factor.
   
  
 0.540
ENSTGUP00000030227
annotation not available
      
 0.508
KBTBD3
Kelch repeat and BTB domain containing 3.
      
 0.504
JMJD4
JmjC domain-containing protein.
   
  
 0.500
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.