STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAMTGuanidinoacetate N-methyltransferase. (296 aa)    
Predicted Functional Partners:
GATM
Uncharacterized protein.
   
 0.729
BRIX1
Biogenesis of ribosomes BRX1.
   
    0.720
RPF2
Brix domain-containing protein.
   
    0.694
GTPBP4
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
    0.689
GNL3
G protein nucleolar 3.
   
  
 0.654
BYSL
Essential nuclear protein 1.
   
    0.652
RPL12
Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.642
BMS1
Bms1-type G domain-containing protein.
   
    0.612
ENSTGUP00000026081
annotation not available
   
 
 0.611
ENSTGUP00000029938
annotation not available
   
 
 0.611
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.