STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REEP1Receptor expression-enhancing protein. (394 aa)    
Predicted Functional Partners:
ZFYVE27
Zinc finger FYVE-type containing 27.
    
 
 0.588
WASHC5
Uncharacterized protein.
      
 0.555
NIPA1
NIPA magnesium transporter 1.
      
 0.552
CNGA4
Cyclic nucleotide-gated cation channel alpha-4.
      
 0.519
SPG11
SPG11 vesicle trafficking associated, spatacsin.
      
 0.512
SPAST
Spastin; Belongs to the AAA ATPase family.
   
  
 0.496
DSTYK
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
  
 0.492
RIC8B
Uncharacterized protein.
      
 0.489
ENSTGUP00000025147
Vesicle-associated membrane protein 5.
   
  
 0.432
RAB3GAP2
Uncharacterized protein.
    
 
 0.431
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.