STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115496802Uncharacterized protein. (578 aa)    
Predicted Functional Partners:
RBCK1
RanBP-type and C3HC4-type zinc finger-containing protein 1.
    
  0.904
CYLD
CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family.
     
  0.900
SPATA2
Spermatogenesis associated 2.
     
 
0.900
LOC115494026
Ubiquitin carboxyl-terminal hydrolase CYLD isoform X1.
     
  0.900
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.796
RANBP2
RAN binding protein 2.
    
 0.521
TASOR2
Uncharacterized protein.
  
 
  0.475
KDM6A
Uncharacterized protein.
    
 0.459
ENSTGUP00000026688
Lysine-specific demethylase 6B.
    
 0.459
CEP295
ALMS_motif domain-containing protein.
  
     0.454
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.