Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACTR10 | DCTN4 | ENSTGUP00000019316 | ENSTGUP00000000867 | Actin related protein 10; Belongs to the actin family. | Dynactin subunit 4. | 0.995 |
ACTR10 | DCTN6 | ENSTGUP00000019316 | ENSTGUP00000025279 | Actin related protein 10; Belongs to the actin family. | Dynactin subunit 6. | 0.995 |
ACTR10 | RAB18 | ENSTGUP00000019316 | ENSTGUP00000027187 | Actin related protein 10; Belongs to the actin family. | Uncharacterized protein. | 0.593 |
CHM | GDI2 | ENSTGUP00000032223 | ENSTGUP00000022072 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.686 |
CHM | RAB18 | ENSTGUP00000032223 | ENSTGUP00000027187 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Uncharacterized protein. | 0.676 |
CHM | RAB3GAP1 | ENSTGUP00000032223 | ENSTGUP00000021411 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | RAB3 GTPase activating protein catalytic subunit 1. | 0.726 |
CHM | RAB3GAP2 | ENSTGUP00000032223 | ENSTGUP00000002840 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Uncharacterized protein. | 0.720 |
CHM | RABGGTA | ENSTGUP00000032223 | ENSTGUP00000020539 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Rab geranylgeranyltransferase subunit alpha. | 0.974 |
DCTN4 | ACTR10 | ENSTGUP00000000867 | ENSTGUP00000019316 | Dynactin subunit 4. | Actin related protein 10; Belongs to the actin family. | 0.995 |
DCTN4 | DCTN6 | ENSTGUP00000000867 | ENSTGUP00000025279 | Dynactin subunit 4. | Dynactin subunit 6. | 0.998 |
DCTN4 | RAB18 | ENSTGUP00000000867 | ENSTGUP00000027187 | Dynactin subunit 4. | Uncharacterized protein. | 0.584 |
DCTN4 | RAB3GAP1 | ENSTGUP00000000867 | ENSTGUP00000021411 | Dynactin subunit 4. | RAB3 GTPase activating protein catalytic subunit 1. | 0.668 |
DCTN4 | RAB3GAP2 | ENSTGUP00000000867 | ENSTGUP00000002840 | Dynactin subunit 4. | Uncharacterized protein. | 0.654 |
DCTN6 | ACTR10 | ENSTGUP00000025279 | ENSTGUP00000019316 | Dynactin subunit 6. | Actin related protein 10; Belongs to the actin family. | 0.995 |
DCTN6 | DCTN4 | ENSTGUP00000025279 | ENSTGUP00000000867 | Dynactin subunit 6. | Dynactin subunit 4. | 0.998 |
DCTN6 | RAB18 | ENSTGUP00000025279 | ENSTGUP00000027187 | Dynactin subunit 6. | Uncharacterized protein. | 0.601 |
GDI2 | CHM | ENSTGUP00000022072 | ENSTGUP00000032223 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.686 |
GDI2 | RAB18 | ENSTGUP00000022072 | ENSTGUP00000027187 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Uncharacterized protein. | 0.736 |
GDI2 | RAB3GAP1 | ENSTGUP00000022072 | ENSTGUP00000021411 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | RAB3 GTPase activating protein catalytic subunit 1. | 0.688 |
GDI2 | RAB3GAP2 | ENSTGUP00000022072 | ENSTGUP00000002840 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Uncharacterized protein. | 0.785 |
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