STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HINFPHistone H4 transcription factor. (603 aa)    
Predicted Functional Partners:
GSC
Goosecoid homeobox.
    
   0.943
LOC100232456
Homeobox domain-containing protein.
    
   0.624
HMX3
H6 family homeobox 3.
    
   0.624
ZNF318
Zinc finger protein 318.
      
 0.565
DCTN2
Uncharacterized protein.
      
 0.547
NPAT
Nuclear protein, coactivator of histone transcription.
    
 
 0.541
LSM10
Sm domain-containing protein.
      
 0.533
E2F7
E2F transcription factor 7.
      
 0.516
LRRC57
Uncharacterized protein.
   
    0.506
TAF8
TATA-box binding protein associated factor 8.
   
    0.506
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.