STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHST11Carbohydrate sulfotransferase. (350 aa)    
Predicted Functional Partners:
CHST13
Carbohydrate sulfotransferase.
  
  
 
0.901
CHST12
Carbohydrate sulfotransferase.
     
 
0.900
GP9
Glycoprotein IX platelet.
     
 0.697
COP1
COP1 E3 ubiquitin ligase.
      
 0.554
CSPG4
Chondroitin sulfate proteoglycan 4.
    
 0.531
PIGB
Mannosyltransferase.
   
  
 0.517
DCN
Decorin; May affect the rate of fibrils formation.
     
 0.515
BCAN
Brevican.
     
 0.489
NCAN
Uncharacterized protein.
     
 0.436
KAZN
Kazrin, periplakin interacting protein.
      
 0.435
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.