STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SELPLGP-selectin glycoprotein ligand 1. (391 aa)    
Predicted Functional Partners:
CASK
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.537
ENSTGUP00000037977
annotation not available
    
 0.440
GLMN
Glomulin, FKBP associated protein.
   
  0.436
UTP20
DRIM domain-containing protein.
   
  0.436
WDR43
WD repeat domain 43.
   
 0.424
NRXN3
Neurexin 3.
    
 0.409
NRXN2
Neurexin 2.
    
 0.409
ENSTGUP00000034897
annotation not available
    
 0.409
NRXN3-2
4.1m domain-containing protein.
    
 0.409
NRXN1
Neurexin 1.
    
 0.409
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.