STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALB1Calbindin 1. (350 aa)    
Predicted Functional Partners:
CASK
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.728
LHX1
LIM homeobox 1.
    
 
 0.698
LHX5
LIM homeobox 5.
    
 
 0.698
PVALB
Putative parvalbumin variant 3; Belongs to the parvalbumin family.
      
 0.663
GAD1
Uncharacterized protein.
   
 
 0.601
WDR90
WD repeat domain 90.
   
 0.593
ENSTGUP00000021569
annotation not available
   
 0.593
SST
Somatostatin.
   
  
 0.572
SDF4
Stromal cell derived factor 4.
      
 0.568
ENSTGUP00000038675
annotation not available
   
 0.539
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.