STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCB8ATP-binding cassette, subfamily B (MDR/TAP), member 8. (794 aa)    
Predicted Functional Partners:
ABCB7
ATP binding cassette subfamily B member 7.
    
0.684
CCDC51
Uncharacterized protein.
    
 
 0.614
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.542
ENSTGUP00000032638
annotation not available
   
 0.533
TDG
Thymine DNA glycosylase.
      
 0.487
E2F6
E2F transcription factor 6.
      
 0.485
COX10
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
 
    
 0.478
ABCB6
ATP binding cassette subfamily B member 6 (Langereis blood group).
  
0.446
KCNJ1
Potassium voltage-gated channel subfamily J member 1.
   
 0.428
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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