STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRP3LDL receptor related protein 3. (850 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
    
 0.646
AGRN
Agrin.
    
 0.570
EGFLAM
EGF like, fibronectin type III and laminin G domains.
    
 0.513
RELN
Reelin.
    
 0.504
VWA5B2
Uncharacterized protein.
      
 0.482
PRKN
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
      
 0.480
ITSN1
Intersectin 1.
    
 0.463
ITSN1-2
Intersectin 1.
    
 0.463
SACM1L
SAC domain-containing protein.
    
 0.437
PCSK9
Peptidase_S8 domain-containing protein; Belongs to the peptidase S8 family.
    
 0.437
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.