STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERG28Taeniopygia guttata ergosterol biosynthesis 28 homolog (ERG28), mRNA. (174 aa)    
Predicted Functional Partners:
CYP51A1
Cytochrome P450 family 51 subfamily A member 1; Belongs to the cytochrome P450 family.
   
 
 0.985
HSD17B7
Hydroxysteroid 17-beta dehydrogenase 7.
   
 
 0.981
SC5D
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 
 0.981
LSS
Lanosterol synthase; Belongs to the terpene cyclase/mutase family.
   
 
 0.979
SIGMAR1
Sigma non-opioid intracellular receptor 1.
   
 
 0.979
FDFT1
Farnesyl-diphosphate farnesyltransferase 1.
   
 
 0.972
R3HDM4
R3H domain containing 4.
   
 
 0.912
NDUFAF6
Uncharacterized protein.
   
 
 0.877
FAXDC2
Fatty acid hydroxylase domain containing 2; Belongs to the sterol desaturase family.
   
 
 0.826
CH25H
Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family.
   
 
 0.826
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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