STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA10Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family. (328 aa)    
Predicted Functional Partners:
TRIB1
Protein kinase domain-containing protein.
      
 0.677
REM1
RRAD and GEM like GTPase 1.
   
  
 0.608
ATXN3
Josephin domain-containing protein.
      
 0.606
RPF2
Brix domain-containing protein.
   
 
 0.584
RPL5
Ribosomal protein L5.
    
 
 0.522
UTP18
UTP18 small subunit processome component.
   
  
 0.515
RRS1
Ribosome biogenesis regulatory protein homolog.
   
 
 0.489
RPL11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.473
MGP
Matrix Gla protein.
      
 0.422
NLE1
Notchless homolog 1.
   
  
 0.418
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.