STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IRX5Uncharacterized protein. (472 aa)    
Predicted Functional Partners:
IRX3
Iroquois-class homeodomain protein IRX-3.
  
  
0.558
PBX3
PBX homeobox 3.
    
0.459
PBX1
PBX homeobox 1.
    
0.459
PBX4
Pre-B-cell leukemia transcription factor 4.
    
0.459
SRF
Serum response factor.
   
 
 0.455
DLX1
Distal-less homeobox 1.
   
 
 0.443
HHEX
Homeobox domain-containing protein.
   
 
 0.429
DLX2
Distal-less homeobox 2.
   
 
 0.414
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.