STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL5A2Uncharacterized protein. (1496 aa)    
Predicted Functional Partners:
COL11A1
Collagen type XI alpha 1 chain.
  
  
0.504
LOC100228206
Collagen type V alpha 1 chain.
  
  
0.489
ENSTGUP00000006159
annotation not available
  
  
0.469
COL11A1-2
Collagen alpha-1(XI) chain isoform X3.
  
  
0.465
POSTN
Periostin.
   
 
 0.462
THEGL
Testicular haploid expressed gene protein-like.
  
     0.416
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.