STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISY1Uncharacterized protein. (279 aa)    
Predicted Functional Partners:
BUD31
Uncharacterized protein.
   
 0.966
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
 0.965
XAB2
Pre-mRNA-splicing factor SYF1.
    
 0.964
SNW1
SNW domain containing 1.
    
 0.949
RBM22
RNA binding motif protein 22.
   
 0.945
PRPF19
Pre-mRNA processing factor 19.
    
 0.943
AQR
Aquarius intron-binding spliceosomal factor.
 
  
 0.924
SYF2
Pre-mRNA-splicing factor SYF2.
   
 
 0.917
PRPF8
MPN domain-containing protein.
    
 
 0.907
CDC5L
Cell division cycle 5 like.
    
 
 0.907
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.