STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRPK3SRSF protein kinase 3. (622 aa)    
Predicted Functional Partners:
U2AF2
U2 small nuclear RNA auxiliary factor 2.
    
 
 0.725
CDC5L
Cell division cycle 5 like.
    
   0.675
SRSF4
Serine and arginine rich splicing factor 4.
    
 
 0.544
SRSF5
Serine and arginine rich splicing factor 5.
    
 
 0.544
LOC100220017
Uncharacterized protein.
    
 
 0.544
SRSF6
Serine and arginine rich splicing factor 6.
    
 
 0.544
SRSF1
RRM domain-containing protein.
    
 
 0.522
ZNF318
Zinc finger protein 318.
    
 
 0.511
SNRNP35
RRM domain-containing protein.
    
 
 0.407
H1A2P2_TAEGU
RRM domain-containing protein.
    
 
 0.407
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.