STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLEC3BC-type lectin domain-containing protein. (188 aa)    
Predicted Functional Partners:
SPP2
Uncharacterized protein.
   
 
 0.629
ITIH4
Uncharacterized protein.
   
 0.554
H0ZG36_TAEGU
Uncharacterized protein.
    
 0.520
LOC100231371
Plasminogen; Plasmin dissolves the fibrin of blood clots and acts as a proteolytic factor in a variety of other processes including embryonic development, tissue remodeling, tumor invasion, and inflammation. In ovulation, weakens the walls of the Graafian follicle. It activates the urokinase-type plasminogen activator, collagenases and several complement zymogens, such as C1 and C5. Cleavage of fibronectin and laminin leads to cell detachment and apoptosis. Also cleaves fibrin, thrombospondin and von Willebrand factor. Its role in tissue remodeling and tumor invasion may be modulated b [...]
    
 0.520
ENSTGUP00000029882
annotation not available
   
 0.505
H0ZZC7_TAEGU
Uncharacterized protein.
   
 0.505
ECM1
Extracellular matrix protein 1.
     
 0.480
TIMP3
TIMP metallopeptidase inhibitor 3.
    
 0.457
APOH
Uncharacterized protein.
     
 0.442
SERPINF1
Serpin family F member 1; Belongs to the serpin family.
   
 
 0.412
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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