STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATF1Activating transcription factor 1. (318 aa)    
Predicted Functional Partners:
CREBBP
CREB binding protein.
   
 0.789
RPS6KA5
Ribosomal protein S6 kinase.
   
 0.769
EP300
E1A binding protein p300.
   
 0.684
MAPKAPK2
Mitogen-activated protein kinase-activated protein kinase 2.
   
 0.657
CRTC2
CREB-regulated transcription coactivator 2 isoform X1.
    
 0.631
MAPKAPK3
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.545
TIMM22
Uncharacterized protein.
      
 0.542
EWSR1
EWS RNA binding protein 1.
      
 0.510
CENPP
Centromere protein P.
    
 0.509
AKT3
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 0.497
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.