STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBN1Uncharacterized protein. (2931 aa)    
Predicted Functional Partners:
LUM
Lumican.
   
 0.938
MFAP2
Microfibril associated protein 2.
   
 0.863
MFAP5
Uncharacterized protein.
   
 
 0.818
DCN
Decorin; May affect the rate of fibrils formation.
   
 0.770
FN1
Fibronectin 1.
   
 0.681
ENSTGUP00000028843
annotation not available
   
 0.667
PLCB4
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.
      
 0.650
FBLN2
Uncharacterized protein.
   
 
0.644
ENSTGUP00000023694
annotation not available
   
 
 0.640
PCSK4
Proprotein convertase subtilisin/kexin type 4.
   
 
 0.628
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.