Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANKRD29 | ZNF521 | ENSTGUP00000010806 | ENSTGUP00000032779 | Ankyrin repeat domain 29. | Zinc finger protein 521. | 0.431 |
EPHB2 | ZNF521 | ENSTGUP00000037069 | ENSTGUP00000032779 | EPH receptor B2. | Zinc finger protein 521. | 0.447 |
HDAC3 | MBD3 | ENSTGUP00000015405 | ENSTGUP00000000205 | Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | MBD domain-containing protein. | 0.833 |
HDAC3 | ZNF521 | ENSTGUP00000015405 | ENSTGUP00000032779 | Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | Zinc finger protein 521. | 0.580 |
MBD3 | HDAC3 | ENSTGUP00000000205 | ENSTGUP00000015405 | MBD domain-containing protein. | Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.833 |
MBD3 | ZNF521 | ENSTGUP00000000205 | ENSTGUP00000032779 | MBD domain-containing protein. | Zinc finger protein 521. | 0.475 |
MBD3 | ZNF536 | ENSTGUP00000000205 | ENSTGUP00000034331 | MBD domain-containing protein. | Zinc finger protein 536. | 0.410 |
MSH3 | MSH6 | ENSTGUP00000007303 | ENSTGUP00000005725 | DNA_MISMATCH_REPAIR_2 domain-containing protein. | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.978 |
MSH3 | ZNF521 | ENSTGUP00000007303 | ENSTGUP00000032779 | DNA_MISMATCH_REPAIR_2 domain-containing protein. | Zinc finger protein 521. | 0.538 |
MSH6 | MSH3 | ENSTGUP00000005725 | ENSTGUP00000007303 | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | DNA_MISMATCH_REPAIR_2 domain-containing protein. | 0.978 |
MSH6 | ZNF521 | ENSTGUP00000005725 | ENSTGUP00000032779 | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | Zinc finger protein 521. | 0.521 |
RBM11 | ZNF521 | ENSTGUP00000020119 | ENSTGUP00000032779 | Splicing regulator RBM11 isoform X3. | Zinc finger protein 521. | 0.426 |
ZNF521 | ANKRD29 | ENSTGUP00000032779 | ENSTGUP00000010806 | Zinc finger protein 521. | Ankyrin repeat domain 29. | 0.431 |
ZNF521 | EPHB2 | ENSTGUP00000032779 | ENSTGUP00000037069 | Zinc finger protein 521. | EPH receptor B2. | 0.447 |
ZNF521 | HDAC3 | ENSTGUP00000032779 | ENSTGUP00000015405 | Zinc finger protein 521. | Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.580 |
ZNF521 | MBD3 | ENSTGUP00000032779 | ENSTGUP00000000205 | Zinc finger protein 521. | MBD domain-containing protein. | 0.475 |
ZNF521 | MSH3 | ENSTGUP00000032779 | ENSTGUP00000007303 | Zinc finger protein 521. | DNA_MISMATCH_REPAIR_2 domain-containing protein. | 0.538 |
ZNF521 | MSH6 | ENSTGUP00000032779 | ENSTGUP00000005725 | Zinc finger protein 521. | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.521 |
ZNF521 | RBM11 | ENSTGUP00000032779 | ENSTGUP00000020119 | Zinc finger protein 521. | Splicing regulator RBM11 isoform X3. | 0.426 |
ZNF521 | ZNF536 | ENSTGUP00000032779 | ENSTGUP00000034331 | Zinc finger protein 521. | Zinc finger protein 536. | 0.562 |
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