STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALM1Calmodulin 2; Belongs to the calmodulin family. (243 aa)    
Predicted Functional Partners:
CAMK2A
Calcium/calmodulin-dependent protein kinase type II subunit alpha isoform X2.
   
 0.985
CAMK2B
Protein kinase domain-containing protein.
   
 0.983
PPP3CA
Serine/threonine-protein phosphatase.
    
 0.978
PHKG1
Phosphorylase kinase catalytic subunit gamma 1; Belongs to the protein kinase superfamily.
   
 0.973
PHKB
Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.
    
 0.971
PPP3CB
Serine/threonine-protein phosphatase.
    
 0.970
PPP3CC-2
Serine/threonine-protein phosphatase.
 
  
 0.970
PPP3R1
Uncharacterized protein.
   
0.969
CAMK4
Calcium/calmodulin dependent protein kinase IV.
   
 0.968
CAMK1D
Protein kinase domain-containing protein.
   
 0.966
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.