STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRGUKLeucine rich repeats and guanylate kinase domain containing. (764 aa)    
Predicted Functional Partners:
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.882
PPP1CA
Serine/threonine-protein phosphatase.
   
 0.882
PPP1CC
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.882
DPY30
Dpy-30 histone methyltransferase complex regulatory subunit.
   
 
 0.881
CASK
Uncharacterized protein; Belongs to the MAGUK family.
    
0.856
SPAG17
Uncharacterized protein.
   
 
 0.846
AK9
Uncharacterized protein.
   
 0.835
LRRC72
Uncharacterized protein.
    
  0.822
POLR3C
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.817
CFAP69
LOW QUALITY PROTEIN: cilia- and flagella-associated protein 69.
    
   0.816
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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