STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100189937Uncharacterized protein. (107 aa)    
Predicted Functional Partners:
ISCA1
Iron-sulfur cluster assembly 1.
      
 0.550
COX16
Cytochrome c oxidase assembly factor COX16.
   
  
 0.524
IBA57
Iron-sulfur cluster assembly factor IBA57.
      
 0.523
ABCB6
ATP binding cassette subfamily B member 6 (Langereis blood group).
      
 0.516
SMTNL2
Smoothelin like 2.
      
 0.516
ENSTGUP00000023416
annotation not available
   
  
 0.491
DPH5
Diphthamide biosynthesis 5.
      
 0.483
ANKRD16
Ankyrin repeat domain 16.
      
 0.475
NSMCE4A
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
      
 0.472
ABCB7
ATP binding cassette subfamily B member 7.
      
 0.434
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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