STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHC3Uncharacterized protein. (1006 aa)    
Predicted Functional Partners:
CBX2
Chromobox 2.
    
 0.940
CBX4
Chromobox 4.
    
 0.938
CBX8
Chromobox 8.
    
 0.915
RNF2
RING-type domain-containing protein.
    
 0.863
RING1
Ring finger protein 1.
    
 0.863
PCGF2
Polycomb group RING finger protein 2.
    
 0.844
BMI1
RAWUL domain-containing protein.
    
 0.844
CBX7
Chromo domain-containing protein.
    
 0.774
EED
Embryonic ectoderm development.
   
 0.734
SCML2
Scm polycomb group protein like 2.
    
0.731
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.