STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI1Uncharacterized protein. (1149 aa)    
Predicted Functional Partners:
CETN2
Uncharacterized protein.
    
 
 0.842
LOC100226754
Uncharacterized protein.
    
 
 0.842
CETN3
Centrin 3.
    
 
 0.840
CRPPA
CDP-L-ribitol pyrophosphorylase A.
    
 
 0.787
PLK1
Polo like kinase 1.
    
 0.718
SEC63
SEC63 homolog, protein translocation regulator.
      
 0.662
PLK2
Serine/threonine-protein kinase PLK.
    
 0.637
PLK3
Polo like kinase 3.
    
 0.637
PLK5
Inactive serine/threonine-protein kinase PLK5.
    
 0.637
RBKS
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
      
 0.604
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.