STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RYBPRanBP2-type domain-containing protein. (369 aa)    
Predicted Functional Partners:
RNF2
RING-type domain-containing protein.
    
 0.886
RING1
Ring finger protein 1.
    
 0.886
PCGF6
RING-type domain-containing protein.
    
 0.856
PCGF1
Polycomb group ring finger 1.
    
 0.852
KDM2B
Lysine demethylase 2B.
    
 
 0.828
L3MBTL2
L3MBTL histone methyl-lysine binding protein 2.
    
 0.828
PCGF5
RING-type domain-containing protein.
    
 0.798
E2F6
E2F transcription factor 6.
   
 0.793
KDM2A
Lysine demethylase 2A.
    
 
 0.789
PCGF3
Polycomb group ring finger 3.
    
 0.787
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.