STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC35F5Solute carrier family 35 member F5. (509 aa)    
Predicted Functional Partners:
SLC35G2
Solute carrier family 35 member G2.
      
 0.529
SLC22A15
Solute carrier family 22 member 15.
    
 
 0.521
TMX3
Thioredoxin related transmembrane protein 3.
     
 0.485
RAB7A
RAB7A, member RAS oncogene family.
 
      0.433
SLC7A2
Solute carrier family 7 member 2.
   
  
 0.426
STOML2
Stomatin like 2.
      
 0.422
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.