STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYMPKSymplekin. (1106 aa)    
Predicted Functional Partners:
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.980
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.979
PCF11
PCF11 cleavage and polyadenylation factor subunit.
    
 0.979
CSTF2
Cleavage stimulation factor subunit 2.
   
 0.979
WDR33
WD repeat domain 33.
    
 0.964
ENSTGUP00000032899
annotation not available
    
 0.964
CSTF3
Cleavage stimulation factor subunit 3.
    
 0.963
FIP1L1
Fip1 domain-containing protein.
   
 0.940
CPSF4
Cleavage and polyadenylation specific factor 4.
   
 0.939
PAPOLG
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 0.930
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.