STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPICPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (210 aa)    
Predicted Functional Partners:
RANBP1
RAN binding protein 1.
 
 
 0.894
ENSTGUP00000019885
annotation not available
   
 
 0.711
ENSTGUP00000026984
annotation not available
   
 
 0.711
WDR36
WD repeat domain 36.
   
 
 0.700
P3H4
Prolyl 3-hydroxylase family member 4 (non-enzymatic).
   
 0.697
CRTAP
Cartilage associated protein.
   
 0.697
UTP4
UTP4 small subunit processome component.
   
 
 0.678
UTP15
UTP15 small subunit processome component.
   
 
 0.676
FLT1
Fms related tyrosine kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
      
 0.673
UTP6
UTP6 small subunit processome component.
   
 
 0.666
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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