Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDX51 | EXOSC10 | ENSTGUP00000034811 | ENSTGUP00000027086 | DEAD-box helicase 51; Belongs to the DEAD box helicase family. | Exosome component 10. | 0.442 |
DDX51 | REXO1 | ENSTGUP00000034811 | ENSTGUP00000036290 | DEAD-box helicase 51; Belongs to the DEAD box helicase family. | RNA exonuclease 1 homolog. | 0.623 |
DDX51 | WDR61 | ENSTGUP00000034811 | ENSTGUP00000033553 | DEAD-box helicase 51; Belongs to the DEAD box helicase family. | Putative recombination protein REC14. | 0.641 |
EXOSC10 | DDX51 | ENSTGUP00000027086 | ENSTGUP00000034811 | Exosome component 10. | DEAD-box helicase 51; Belongs to the DEAD box helicase family. | 0.442 |
EXOSC10 | LAS1L | ENSTGUP00000027086 | ENSTGUP00000002922 | Exosome component 10. | Uncharacterized protein. | 0.645 |
EXOSC10 | REXO1 | ENSTGUP00000027086 | ENSTGUP00000036290 | Exosome component 10. | RNA exonuclease 1 homolog. | 0.545 |
EXOSC10 | REXO2 | ENSTGUP00000027086 | ENSTGUP00000000124 | Exosome component 10. | RNA exonuclease 2. | 0.677 |
EXOSC10 | TEX10 | ENSTGUP00000027086 | ENSTGUP00000009043 | Exosome component 10. | Testis expressed 10. | 0.492 |
EXOSC10 | WDR61 | ENSTGUP00000027086 | ENSTGUP00000033553 | Exosome component 10. | Putative recombination protein REC14. | 0.555 |
LAS1L | EXOSC10 | ENSTGUP00000002922 | ENSTGUP00000027086 | Uncharacterized protein. | Exosome component 10. | 0.645 |
LAS1L | REXO1 | ENSTGUP00000002922 | ENSTGUP00000036290 | Uncharacterized protein. | RNA exonuclease 1 homolog. | 0.527 |
LAS1L | TEX10 | ENSTGUP00000002922 | ENSTGUP00000009043 | Uncharacterized protein. | Testis expressed 10. | 0.965 |
LOC115498157 | REXO1 | ENSTGUP00000029503 | ENSTGUP00000036290 | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | RNA exonuclease 1 homolog. | 0.654 |
LOC115498157 | YARS1 | ENSTGUP00000029503 | ENSTGUP00000001391 | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | Tyrosine--tRNA ligase. | 0.585 |
PAN3 | REXO1 | ENSTGUP00000011983 | ENSTGUP00000036290 | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | RNA exonuclease 1 homolog. | 0.830 |
PCNA | REXO1 | ENSTGUP00000028759 | ENSTGUP00000036290 | Proliferating cell nuclear antigen. | RNA exonuclease 1 homolog. | 0.654 |
PCNA | YARS1 | ENSTGUP00000028759 | ENSTGUP00000001391 | Proliferating cell nuclear antigen. | Tyrosine--tRNA ligase. | 0.585 |
REXO1 | DDX51 | ENSTGUP00000036290 | ENSTGUP00000034811 | RNA exonuclease 1 homolog. | DEAD-box helicase 51; Belongs to the DEAD box helicase family. | 0.623 |
REXO1 | EXOSC10 | ENSTGUP00000036290 | ENSTGUP00000027086 | RNA exonuclease 1 homolog. | Exosome component 10. | 0.545 |
REXO1 | LAS1L | ENSTGUP00000036290 | ENSTGUP00000002922 | RNA exonuclease 1 homolog. | Uncharacterized protein. | 0.527 |
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