STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ICE1Uncharacterized protein. (1811 aa)    
Predicted Functional Partners:
ICE2
Interactor of little elongation complex ELL subunit 2.
    
 0.873
LOC115492536
ELL domain-containing protein.
    
 0.561
ELL
Elongation factor for RNA polymerase II.
    
 0.561
ZC3H6
Zinc finger CCCH-type containing 6.
   
 
 0.537
EAF1
EAF domain-containing protein.
    
 
 0.537
ENSTGUP00000030937
annotation not available
   
 
 0.537
ENSTGUP00000034764
annotation not available
   
 
 0.537
ENSTGUP00000018684
annotation not available
   
 
 0.533
MARVELD2
MARVEL domain containing 2.
    
 0.460
RPAP2
RTR1-type domain-containing protein.
     
 0.433
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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