STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H0ZST3_TAEGUUncharacterized protein. (201 aa)    
Predicted Functional Partners:
H0ZST4_TAEGU
Uncharacterized protein.
   
  
 0.682
H0ZST2_TAEGU
Uncharacterized protein.
   
 
 0.640
ENSTGUP00000037472
annotation not available
     
 0.595
LOC100223312
Uncharacterized protein.
   
    0.551
H0ZST7_TAEGU
Uncharacterized protein.
   
  
 0.539
LOC101233915
Uncharacterized protein.
     
 0.528
H0ZSS9_TAEGU
Uncharacterized protein.
     
 0.522
ENSTGUP00000034621
annotation not available
   
    0.497
H0ZST6_TAEGU
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
      
 0.483
LOC100226218
Uncharacterized protein.
      
 0.482
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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