STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSPNSarcospan. (256 aa)    
Predicted Functional Partners:
SGCG
Sarcoglycan gamma.
   
 
 0.688
SGCE
Sarcoglycan epsilon.
   
  
 0.593
SEMA4D
Semaphorin 4D; Belongs to the semaphorin family.
      
 0.589
SNTA1
Syntrophin alpha 1.
      
 0.520
DAG1
Dystroglycan 1.
      
 0.504
LOC115493455
a_DG1_N2 domain-containing protein.
      
 0.504
CAV1
Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.
   
  
 0.479
SGCZ
Sarcoglycan zeta.
   
 
 0.473
SGCD
Sarcoglycan delta.
   
 
 0.473
ARRDC2
Arrestin domain containing 2.
   
  
 0.472
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.