STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPLANE2Uncharacterized protein. (274 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
    
 0.860
ENSTGUP00000032818
Muscle M-line assembly protein unc-89-like.
   
 0.795
ENSTGUP00000024970
annotation not available
    
 
 0.782
ITSN1
Intersectin 1.
    
 0.768
ITSN1-2
Intersectin 1.
    
 0.768
INTU
Inturned planar cell polarity protein.
    
 0.767
WDPCP
WD repeat containing planar cell polarity effector.
    
 
 0.652
MST1R
Macrophage stimulating 1 receptor.
   
 0.627
MET
MET proto-oncogene, receptor tyrosine kinase.
   
 0.627
MYO9B
Myosin IXB.
    
 0.586
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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