STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNAJC12DnaJ heat shock protein family (Hsp40) member C12. (197 aa)    
Predicted Functional Partners:
CDC5L
Cell division cycle 5 like.
    
 
 0.619
GCHFR
GTP cyclohydrolase I feedback regulator.
      
 0.556
DNAJC1
DnaJ heat shock protein family (Hsp40) member C1.
      
 0.541
ATP7A
ATPase copper transporting alpha.
      
 0.509
SLC38A2
Solute carrier family 38 member 2.
      
 0.478
RAD1
RAD1 checkpoint DNA exonuclease.
    
 
 0.446
GAK
Cyclin G associated kinase.
    
 
 0.438
POLG
DNA polymerase gamma, catalytic subunit.
      
 0.435
HSPB3
Heat shock protein family B (small) member 3; Belongs to the small heat shock protein (HSP20) family.
      
 0.426
DNAJC13
DnaJ heat shock protein family (Hsp40) member C13.
      
 0.426
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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