STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNOT9CCR4-NOT transcription complex subunit 9. (305 aa)    
Predicted Functional Partners:
CNOT1
CCR4-NOT transcription complex subunit 1.
    
 0.999
CNOT2
CCR4-NOT transcription complex subunit 2.
    
 0.998
CNOT4
CCR4-NOT transcription complex subunit 4.
    
 0.998
CNOT11
Uncharacterized protein.
    
 0.984
CNOT7
CCR4-NOT transcription complex subunit 7.
   
 0.982
CNOT8
Uncharacterized protein.
   
 0.977
CNOT10
Uncharacterized protein.
    
 0.972
ENSTGUP00000026987
annotation not available
    
 0.964
ENSTGUP00000035941
annotation not available
    
 0.964
MTREX
Mtr4 exosome RNA helicase.
   
 
 0.954
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.