STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCOLCEProcollagen C-endopeptidase enhancer. (565 aa)    
Predicted Functional Partners:
AMN
Amnion associated transmembrane protein.
   
 0.739
MST1R
Macrophage stimulating 1 receptor.
    
 0.567
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.567
GC
Vitamin D-binding protein.
    
 0.548
COL22A1
Collagen type XXII alpha 1 chain.
    
 0.507
LOC100230622
DUF4430 domain-containing protein.
    
 0.496
TLL1
Metalloendopeptidase.
   
0.474
TLL2
Metalloendopeptidase.
   
0.474
ENSTGUP00000024690
annotation not available
   
0.474
BMP1
Bone morphogenetic protein 1 isoform X1.
   
0.474
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.