STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN82587.1Hypothetical protein. (180 aa)    
Predicted Functional Partners:
SIN85437.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
   0.461
SIN82579.1
Hypothetical protein.
      
0.448
SIN89560.1
Thioredoxin-like.
    
   0.420
SIO33204.1
Hypothetical protein.
    
   0.420
SIN82599.1
SpoIIAA-like.
       0.417
Your Current Organism:
Chryseobacterium scophthalmum
NCBI taxonomy Id: 59733
Other names: ATCC 700039, C. scophthalmum, CCM 4109, CCUG 33454, CIP 104199, DSM 16779, Flavobacterium scophthalmum, LMG 13028, LMG:13028
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.