Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIN84850.1 | SIN84878.1 | SAMN05421769_0564 | SAMN05421769_0566 | Peptide-methionine (S)-S-oxide reductase. | AhpC/TSA family protein. | 0.665 |
SIN84850.1 | SIN84891.1 | SAMN05421769_0564 | SAMN05421769_0567 | Peptide-methionine (S)-S-oxide reductase. | Peptide-methionine (R)-S-oxide reductase. | 0.832 |
SIN84850.1 | SIO00538.1 | SAMN05421769_0564 | SAMN05421769_1728 | Peptide-methionine (S)-S-oxide reductase. | Thioredoxin-like. | 0.509 |
SIN84850.1 | SIO32648.1 | SAMN05421769_0564 | SAMN05421769_3505 | Peptide-methionine (S)-S-oxide reductase. | Thioredoxin-like domain-containing protein. | 0.509 |
SIN84850.1 | SIO37103.1 | SAMN05421769_0564 | SAMN05421769_3925 | Peptide-methionine (S)-S-oxide reductase. | Thiol:disulfide interchange protein DsbD. | 0.509 |
SIN84850.1 | SIO40352.1 | SAMN05421769_0564 | SAMN05421769_4196 | Peptide-methionine (S)-S-oxide reductase. | Thioredoxin. | 0.509 |
SIN84850.1 | msrA | SAMN05421769_0564 | SAMN05421769_0565 | Peptide-methionine (S)-S-oxide reductase. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.784 |
SIN84878.1 | SIN84850.1 | SAMN05421769_0566 | SAMN05421769_0564 | AhpC/TSA family protein. | Peptide-methionine (S)-S-oxide reductase. | 0.665 |
SIN84878.1 | SIN84891.1 | SAMN05421769_0566 | SAMN05421769_0567 | AhpC/TSA family protein. | Peptide-methionine (R)-S-oxide reductase. | 0.694 |
SIN84878.1 | msrA | SAMN05421769_0566 | SAMN05421769_0565 | AhpC/TSA family protein. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.671 |
SIN84891.1 | SIN84850.1 | SAMN05421769_0567 | SAMN05421769_0564 | Peptide-methionine (R)-S-oxide reductase. | Peptide-methionine (S)-S-oxide reductase. | 0.832 |
SIN84891.1 | SIN84878.1 | SAMN05421769_0567 | SAMN05421769_0566 | Peptide-methionine (R)-S-oxide reductase. | AhpC/TSA family protein. | 0.694 |
SIN84891.1 | SIO00538.1 | SAMN05421769_0567 | SAMN05421769_1728 | Peptide-methionine (R)-S-oxide reductase. | Thioredoxin-like. | 0.528 |
SIN84891.1 | SIO32648.1 | SAMN05421769_0567 | SAMN05421769_3505 | Peptide-methionine (R)-S-oxide reductase. | Thioredoxin-like domain-containing protein. | 0.528 |
SIN84891.1 | SIO37103.1 | SAMN05421769_0567 | SAMN05421769_3925 | Peptide-methionine (R)-S-oxide reductase. | Thiol:disulfide interchange protein DsbD. | 0.551 |
SIN84891.1 | SIO40352.1 | SAMN05421769_0567 | SAMN05421769_4196 | Peptide-methionine (R)-S-oxide reductase. | Thioredoxin. | 0.528 |
SIN84891.1 | msrA | SAMN05421769_0567 | SAMN05421769_0565 | Peptide-methionine (R)-S-oxide reductase. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.991 |
SIN84891.1 | msrA-2 | SAMN05421769_0567 | SAMN05421769_2306 | Peptide-methionine (R)-S-oxide reductase. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.982 |
SIN84891.1 | rplT | SAMN05421769_0567 | SAMN05421769_0642 | Peptide-methionine (R)-S-oxide reductase. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.540 |
SIN84891.1 | rpmB | SAMN05421769_0567 | SAMN05421769_1986 | Peptide-methionine (R)-S-oxide reductase. | LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family. | 0.520 |
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