STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIO02356.1Protein of unknown function. (149 aa)    
Predicted Functional Partners:
SIO02371.1
Conjugative transposon protein TraO.
 
     0.947
SIO02386.1
Bacteroides conjugative transposon TraN protein.
 
     0.933
SIO02405.1
Bacteroides conjugative transposon TraM protein.
 
     0.888
SIO02460.1
Protein of unknown function.
 
     0.877
SIO02448.1
Bacteroides conjugative transposon TraJ protein.
 
     0.859
SIO02433.1
Bacteroides conjugative transposon TraK protein.
 
     0.848
SIO02491.1
Protein of unknown function.
 
     0.822
SIO02477.1
Bacteroides conjugation system ATPase, TraG family.
 
     0.791
SIN96841.1
Conjugative transposon protein TraO.
 
     0.782
SIO02506.1
Protein of unknown function.
 
     0.778
Your Current Organism:
Chryseobacterium scophthalmum
NCBI taxonomy Id: 59733
Other names: ATCC 700039, C. scophthalmum, CCM 4109, CCUG 33454, CIP 104199, DSM 16779, Flavobacterium scophthalmum, LMG 13028, LMG:13028
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.