STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIO22324.1Glycosyltransferase involved in cell wall bisynthesis. (384 aa)    
Predicted Functional Partners:
SIO22298.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.933
SIO22313.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.874
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.669
SIO22289.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.617
SIO13372.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.569
SIO16055.1
UDP-glucuronate 4-epimerase.
  
 
  0.567
SIO22435.1
RmlD substrate binding domain-containing protein.
  
 
  0.560
SIO35717.1
Hypothetical protein.
  
     0.554
SIO22335.1
Methyltransferase domain-containing protein.
  
    0.548
SIO22361.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.538
Your Current Organism:
Chryseobacterium scophthalmum
NCBI taxonomy Id: 59733
Other names: ATCC 700039, C. scophthalmum, CCM 4109, CCUG 33454, CIP 104199, DSM 16779, Flavobacterium scophthalmum, LMG 13028, LMG:13028
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