Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIN82361.1 | SIN82477.1 | SAMN05421769_0357 | SAMN05421769_0370 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SIN82361.1 | SIN83876.1 | SAMN05421769_0357 | SAMN05421769_0491 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.999 |
SIN82361.1 | SIO31974.1 | SAMN05421769_0357 | SAMN05421769_3425 | Signal transduction histidine kinase. | Hypothetical protein. | 0.580 |
SIN82361.1 | SIO31984.1 | SAMN05421769_0357 | SAMN05421769_3426 | Signal transduction histidine kinase. | Hypothetical protein. | 0.580 |
SIN82361.1 | guaB | SAMN05421769_0357 | SAMN05421769_3988 | Signal transduction histidine kinase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.707 |
SIN82477.1 | SIN82361.1 | SAMN05421769_0370 | SAMN05421769_0357 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SIN82477.1 | SIN83876.1 | SAMN05421769_0370 | SAMN05421769_0491 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SIN82477.1 | SIO31974.1 | SAMN05421769_0370 | SAMN05421769_3425 | PAS domain S-box-containing protein. | Hypothetical protein. | 0.798 |
SIN82477.1 | SIO31984.1 | SAMN05421769_0370 | SAMN05421769_3426 | PAS domain S-box-containing protein. | Hypothetical protein. | 0.798 |
SIN82477.1 | guaB | SAMN05421769_0370 | SAMN05421769_3988 | PAS domain S-box-containing protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.801 |
SIN83876.1 | SIN82361.1 | SAMN05421769_0491 | SAMN05421769_0357 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.999 |
SIN83876.1 | SIN82477.1 | SAMN05421769_0491 | SAMN05421769_0370 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SIN83876.1 | SIO31974.1 | SAMN05421769_0491 | SAMN05421769_3425 | Signal transduction histidine kinase. | Hypothetical protein. | 0.863 |
SIN83876.1 | SIO31984.1 | SAMN05421769_0491 | SAMN05421769_3426 | Signal transduction histidine kinase. | Hypothetical protein. | 0.863 |
SIN83876.1 | guaB | SAMN05421769_0491 | SAMN05421769_3988 | Signal transduction histidine kinase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.792 |
SIN85969.1 | SIO31974.1 | SAMN05421769_0653 | SAMN05421769_3425 | Por secretion system C-terminal sorting domain-containing protein. | Hypothetical protein. | 0.420 |
SIN85969.1 | SIO31984.1 | SAMN05421769_0653 | SAMN05421769_3426 | Por secretion system C-terminal sorting domain-containing protein. | Hypothetical protein. | 0.420 |
SIN85969.1 | guaB | SAMN05421769_0653 | SAMN05421769_3988 | Por secretion system C-terminal sorting domain-containing protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.768 |
SIN90677.1 | SIO31974.1 | SAMN05421769_1023 | SAMN05421769_3425 | Topoisomerase-4 subunit B. | Hypothetical protein. | 0.462 |
SIN90677.1 | SIO31984.1 | SAMN05421769_1023 | SAMN05421769_3426 | Topoisomerase-4 subunit B. | Hypothetical protein. | 0.462 |
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