STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIO33628.1Gliding motility-associated C-terminal domain-containing protein. (1029 aa)    
Predicted Functional Partners:
SIN94874.1
Uncharacterized membrane protein.
  
     0.713
SIO25211.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.684
SIN88457.1
Hypothetical protein.
  
     0.628
SIO13321.1
Outer membrane protein beta-barrel domain-containing protein.
  
    0.612
SIO20598.1
Hypothetical protein.
  
     0.585
SIO40471.1
Hypothetical protein.
  
     0.567
SIO21771.1
Hypothetical protein.
  
     0.563
SIN83954.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.555
SIN84087.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.550
SIO33621.1
Gliding motility-associated C-terminal domain-containing protein.
 
    
0.546
Your Current Organism:
Chryseobacterium scophthalmum
NCBI taxonomy Id: 59733
Other names: ATCC 700039, C. scophthalmum, CCM 4109, CCUG 33454, CIP 104199, DSM 16779, Flavobacterium scophthalmum, LMG 13028, LMG:13028
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.