STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K5VNU2_AGABUSuf domain-containing protein. (791 aa)    
Predicted Functional Partners:
K5XTM9_AGABU
RRM domain-containing protein.
   
 0.999
K5WXE4_AGABU
CID domain-containing protein.
    
 0.998
K5XEL8_AGABU
Uncharacterized protein.
    
 0.998
K5WZY8_AGABU
CPSF_A domain-containing protein.
   
 0.990
K5XI45_AGABU
WD_REPEATS_REGION domain-containing protein.
   
 0.979
K5X9P4_AGABU
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 0.978
K5XBR6_AGABU
Uncharacterized protein.
   
 0.965
K5X4T1_AGABU
Uncharacterized protein.
   
 0.948
CLP1
mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.
    
 0.943
K5Y6J7_AGABU
Uncharacterized protein.
    
 0.940
Your Current Organism:
Agaricus bisporus
NCBI taxonomy Id: 597362
Other names: A. bisporus var. burnettii JB137-S8, Agaricus bisporus var. burnettii JB137-S8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.