K5W4B5_AGABU protein (Agaricus bisporus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

K5W4B5_AGABU

Uncharacterized protein. (452 aa)

Predicted Functional Partners:

K5Y3K4_AGABU

0.946

K5W9G3_AGABU

0.874

K5X7R7_AGABU

0.756

K5Y2S8_AGABU

0.694

K5VHC9_AGABU

0.676

K5W7I9_AGABU

0.673

K5VZE1_AGABU

0.669

K5XIA3_AGABU

0.585

K5XPD2_AGABU

0.533

K5XJ26_AGABU

0.527

Your Current Organism:

Agaricus bisporus

NCBI taxonomy Id: 597362
Other names: A. bisporus var. burnettii JB137-S8, Agaricus bisporus var. burnettii JB137-S8

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K5VHC9_AGABU	K5VZE1_AGABU	K5VHC9	K5VZE1	Proton_antipo_M domain-containing protein.	Uncharacterized protein.	0.995
K5VHC9_AGABU	K5W4B5_AGABU	K5VHC9	K5W4B5	Proton_antipo_M domain-containing protein.	Uncharacterized protein.	0.676
K5VHC9_AGABU	K5W7I9_AGABU	K5VHC9	K5W7I9	Proton_antipo_M domain-containing protein.	Uncharacterized protein.	0.988
K5VZE1_AGABU	K5VHC9_AGABU	K5VZE1	K5VHC9	Uncharacterized protein.	Proton_antipo_M domain-containing protein.	0.995
K5VZE1_AGABU	K5W4B5_AGABU	K5VZE1	K5W4B5	Uncharacterized protein.	Uncharacterized protein.	0.669
K5VZE1_AGABU	K5W7I9_AGABU	K5VZE1	K5W7I9	Uncharacterized protein.	Uncharacterized protein.	0.991
K5W4B5_AGABU	K5VHC9_AGABU	K5W4B5	K5VHC9	Uncharacterized protein.	Proton_antipo_M domain-containing protein.	0.676
K5W4B5_AGABU	K5VZE1_AGABU	K5W4B5	K5VZE1	Uncharacterized protein.	Uncharacterized protein.	0.669
K5W4B5_AGABU	K5W7I9_AGABU	K5W4B5	K5W7I9	Uncharacterized protein.	Uncharacterized protein.	0.673
K5W4B5_AGABU	K5W9G3_AGABU	K5W4B5	K5W9G3	Uncharacterized protein.	Importin subunit alpha; Belongs to the importin alpha family.	0.874
K5W4B5_AGABU	K5X7R7_AGABU	K5W4B5	K5X7R7	Uncharacterized protein.	Uncharacterized protein.	0.756
K5W4B5_AGABU	K5XIA3_AGABU	K5W4B5	K5XIA3	Uncharacterized protein.	Importin N-terminal domain-containing protein.	0.585
K5W4B5_AGABU	K5XJ26_AGABU	K5W4B5	K5XJ26	Uncharacterized protein.	Nuclear pore protein.	0.527
K5W4B5_AGABU	K5XPD2_AGABU	K5W4B5	K5XPD2	Uncharacterized protein.	Importin N-terminal domain-containing protein.	0.533
K5W4B5_AGABU	K5Y2S8_AGABU	K5W4B5	K5Y2S8	Uncharacterized protein.	VPS9 domain-containing protein.	0.694
K5W4B5_AGABU	K5Y3K4_AGABU	K5W4B5	K5Y3K4	Uncharacterized protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.946
K5W7I9_AGABU	K5VHC9_AGABU	K5W7I9	K5VHC9	Uncharacterized protein.	Proton_antipo_M domain-containing protein.	0.988
K5W7I9_AGABU	K5VZE1_AGABU	K5W7I9	K5VZE1	Uncharacterized protein.	Uncharacterized protein.	0.991
K5W7I9_AGABU	K5W4B5_AGABU	K5W7I9	K5W4B5	Uncharacterized protein.	Uncharacterized protein.	0.673
K5W7I9_AGABU	K5Y2S8_AGABU	K5W7I9	K5Y2S8	Uncharacterized protein.	VPS9 domain-containing protein.	0.629