K5W6S5_AGABU protein (Agaricus bisporus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

K5W6S5_AGABU

Uncharacterized protein; Belongs to the AAA ATPase family. (416 aa)

Predicted Functional Partners:

K5XAA6_AGABU

0.580

QCR2

0.552

K5XUS5_AGABU

0.544

K5WLQ3_AGABU

0.543

K5WY70_AGABU

0.530

K5VL35_AGABU

0.522

K5WUX2_AGABU

0.522

K5WWX7_AGABU

0.522

K5Y6C4_AGABU

0.522

K5WA06_AGABU

0.517

Your Current Organism:

Agaricus bisporus

NCBI taxonomy Id: 597362
Other names: A. bisporus var. burnettii JB137-S8, Agaricus bisporus var. burnettii JB137-S8

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K5VL35_AGABU	K5W6S5_AGABU	K5VL35	K5W6S5	PHB domain-containing protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.522
K5VL35_AGABU	K5WUX2_AGABU	K5VL35	K5WUX2	PHB domain-containing protein.	Prohibitin.	0.796
K5VL35_AGABU	K5Y6C4_AGABU	K5VL35	K5Y6C4	PHB domain-containing protein.	Prohibitin.	0.813
K5W6S5_AGABU	K5VL35_AGABU	K5W6S5	K5VL35	Uncharacterized protein; Belongs to the AAA ATPase family.	PHB domain-containing protein.	0.522
K5W6S5_AGABU	K5WA06_AGABU	K5W6S5	K5WA06	Uncharacterized protein; Belongs to the AAA ATPase family.	Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.	0.517
K5W6S5_AGABU	K5WLQ3_AGABU	K5W6S5	K5WLQ3	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.543
K5W6S5_AGABU	K5WUX2_AGABU	K5W6S5	K5WUX2	Uncharacterized protein; Belongs to the AAA ATPase family.	Prohibitin.	0.522
K5W6S5_AGABU	K5WWX7_AGABU	K5W6S5	K5WWX7	Uncharacterized protein; Belongs to the AAA ATPase family.	PHB domain-containing protein.	0.522
K5W6S5_AGABU	K5WY70_AGABU	K5W6S5	K5WY70	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.530
K5W6S5_AGABU	K5XAA6_AGABU	K5W6S5	K5XAA6	Uncharacterized protein; Belongs to the AAA ATPase family.	AA_TRNA_LIGASE_II domain-containing protein.	0.580
K5W6S5_AGABU	K5XUS5_AGABU	K5W6S5	K5XUS5	Uncharacterized protein; Belongs to the AAA ATPase family.	Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.	0.544
K5W6S5_AGABU	K5Y6C4_AGABU	K5W6S5	K5Y6C4	Uncharacterized protein; Belongs to the AAA ATPase family.	Prohibitin.	0.522
K5W6S5_AGABU	QCR2	K5W6S5	K5WZD0	Uncharacterized protein; Belongs to the AAA ATPase family.	QCR2 subunit 2 of the ubiquinol cytochrome-c reductase complex.	0.552
K5WA06_AGABU	K5W6S5_AGABU	K5WA06	K5W6S5	Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.517
K5WA06_AGABU	K5XUS5_AGABU	K5WA06	K5XUS5	Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.	Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.	0.467
K5WA06_AGABU	QCR2	K5WA06	K5WZD0	Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.	QCR2 subunit 2 of the ubiquinol cytochrome-c reductase complex.	0.504
K5WLQ3_AGABU	K5W6S5_AGABU	K5WLQ3	K5W6S5	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.543
K5WLQ3_AGABU	QCR2	K5WLQ3	K5WZD0	Uncharacterized protein.	QCR2 subunit 2 of the ubiquinol cytochrome-c reductase complex.	0.642
K5WUX2_AGABU	K5VL35_AGABU	K5WUX2	K5VL35	Prohibitin.	PHB domain-containing protein.	0.796
K5WUX2_AGABU	K5W6S5_AGABU	K5WUX2	K5W6S5	Prohibitin.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.522