Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
K5W134_AGABU | K5W7D3_AGABU | K5W134 | K5W7D3 | Uncharacterized protein. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.970 |
K5W134_AGABU | K5WBE8_AGABU | K5W134 | K5WBE8 | Uncharacterized protein. | Tr-type G domain-containing protein. | 0.996 |
K5W134_AGABU | K5WIS3_AGABU | K5W134 | K5WIS3 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.999 |
K5W134_AGABU | K5WUC7_AGABU | K5W134 | K5WUC7 | Uncharacterized protein. | Uncharacterized protein. | 0.917 |
K5W134_AGABU | K5X5Q8_AGABU | K5W134 | K5X5Q8 | Uncharacterized protein. | Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. | 0.977 |
K5W134_AGABU | K5XAG8_AGABU | K5W134 | K5XAG8 | Uncharacterized protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.996 |
K5W134_AGABU | K5XK56_AGABU | K5W134 | K5XK56 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
K5W134_AGABU | K5XVK4_AGABU | K5W134 | K5XVK4 | Uncharacterized protein. | Uncharacterized protein. | 0.995 |
K5W134_AGABU | K5XW14_AGABU | K5W134 | K5XW14 | Uncharacterized protein. | MPN domain-containing protein. | 0.996 |
K5W134_AGABU | K5Y686_AGABU | K5W134 | K5Y686 | Uncharacterized protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
K5W7D3_AGABU | K5W134_AGABU | K5W7D3 | K5W134 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.970 |
K5W7D3_AGABU | K5WBE8_AGABU | K5W7D3 | K5WBE8 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Tr-type G domain-containing protein. | 0.998 |
K5W7D3_AGABU | K5WIS3_AGABU | K5W7D3 | K5WIS3 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.966 |
K5W7D3_AGABU | K5WUC7_AGABU | K5W7D3 | K5WUC7 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.986 |
K5W7D3_AGABU | K5X5Q8_AGABU | K5W7D3 | K5X5Q8 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. | 0.987 |
K5W7D3_AGABU | K5XAG8_AGABU | K5W7D3 | K5XAG8 | Uncharacterized protein; Belongs to the DEAD box helicase family. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.975 |
K5W7D3_AGABU | K5XK56_AGABU | K5W7D3 | K5XK56 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Small nuclear ribonucleoprotein Sm D2. | 0.987 |
K5W7D3_AGABU | K5XVK4_AGABU | K5W7D3 | K5XVK4 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.997 |
K5W7D3_AGABU | K5XW14_AGABU | K5W7D3 | K5XW14 | Uncharacterized protein; Belongs to the DEAD box helicase family. | MPN domain-containing protein. | 0.999 |
K5W7D3_AGABU | K5Y686_AGABU | K5W7D3 | K5Y686 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.982 |
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